SRR3127829.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127829.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	954168
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10051	1.053378440693882	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	7578	0.7941997635636492	No Hit
GCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTCTG	4418	0.46302118704462947	No Hit
CTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTCTGC	3979	0.4170125177117657	No Hit
CCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTCTG	3750	0.39301255124883666	No Hit
AAAGCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTT	2142	0.22448876927333553	No Hit
GGTACTGAACCTACGAGTACACCGACTACGGCGGACTAATCTTCAACTCC	1697	0.17785127985847354	No Hit
TCCGCTACGACCAACTCATACACCTGTCTCTTATACACATCTGACGCACG	1674	0.1754408028774807	No Hit
AGCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTCT	1425	0.14934476947455794	No Hit
TAGACCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCT	1400	0.14672468579956569	No Hit
CGCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTCT	1395	0.14620066906456725	No Hit
GGCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTCT	1309	0.13718758122259395	No Hit
ACTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTCTG	1164	0.12199109590763892	No Hit
GAACCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTT	1112	0.11654132186365504	No Hit
AGAGCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTT	1095	0.11475966496466031	No Hit
GGAACTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTT	996	0.10438413361169101	No Hit
AAAGCGGCTGTGCAGACACTGTCTCTTATACACATCTGACGCACGAGTCT	979	0.1026024767126963	No Hit
ACCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTCT	973	0.10197365663069816	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	2970	0.0	86.16119	1
CGCTACG	1490	0.0	84.21842	3
TCCGCTA	1520	0.0	83.24878	1
AGGGATG	2770	0.0	83.13779	5
AGGGAAT	1965	0.0	82.75527	5
GGGAATG	2210	0.0	82.72551	6
GGATGGC	2280	0.0	82.45315	7
CGACCAA	1485	0.0	81.97009	8
GCTACGA	1520	0.0	81.933525	4
GATGGCA	2155	0.0	81.78358	8
CTACGAC	1530	0.0	81.70946	5
ACGACCA	1480	0.0	81.61191	7
CGAAGGG	745	0.0	81.3796	2
AGGGTAT	570	0.0	80.804085	5
ACGGGTA	105	0.0	80.564285	4
GGAATGC	875	0.0	78.95714	7
TACGAGG	150	0.0	78.40034	1
GCATTCG	30	1.4562647E-6	78.3305	8
AAGGGCA	1260	0.0	78.32639	4
ATGGCAC	2215	0.0	78.08295	9