SRR3127817.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127817.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	9968028
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	385927	3.871648434374382	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	38963	0.39087972064283927	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCTCCCATGGTCGTATGCCGTCT	22412	0.22483885478652346	No Hit
CGTTCTGTCTCTTATACACATCTGACGCTCCCATGGTCGTATGCCGTCTT	20900	0.2096703580688176	No Hit
CGCTGTCTCTTATACACATCTGACGCTCCCATGGTCGTATGCCGTCTTCT	18979	0.19039874286067415	No Hit
AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	14206	0.1425156510395035	No Hit
GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	13419	0.13462040836963943	No Hit
CCTGTCTCTTATACACATCTGACGCTCCCATGGTCGTATGCCGTCTTCTG	12155	0.12193986614002289	No Hit
GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12002	0.12040495873406455	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCTCCCATGGTCGTATGCCGTC	10867	0.10901855412123643	No Hit
GAGCAGGAGGCTGACAATGAGGTAGACGAAGAAGAGGAAGAAGGTGGGGA	10680	0.10714255618062068	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	109690	90.23522	1
TAGTAGG	3440	72.752945	1
ATAGGGC	4500	71.66768	3
AGGGACT	20815	70.084076	5
ATAGAGG	6675	69.27868	1
GGTAAGG	5320	68.44263	1
ATAGGGA	6705	68.22222	3
AGTAGGG	14390	67.89195	2
AGATAGG	5155	66.618	1
GACTTAA	16215	66.599434	8
AATAGGG	12835	66.55683	2
AAGGGGC	33990	66.50119	4
AGTAAGG	5440	66.41401	1
GTTTTTT	150130	66.205124	2
GGATAGG	5420	65.877914	1
GAATAGG	5735	65.86876	1
GTATAGG	2850	65.86056	1
TAGGGAC	4740	65.758415	4
TAGGGAT	4135	65.37451	4
GTAGGGA	6645	65.23005	3