SRR3127810.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127810.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	827102
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9443	1.1416971546435628	No Hit
GCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCTG	3558	0.4301766892112461	No Hit
CCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCTG	3251	0.3930591390179204	No Hit
CTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCTGC	3065	0.3705709815718013	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA	1340	0.16201145686989027	No Hit
AGCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCT	1047	0.12658656368863816	No Hit
GGCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCT	960	0.11606790939932439	No Hit
CGCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCT	880	0.10639558361604737	No Hit
ACTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCTG	879	0.1062746795437564	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	862	0.10421931031481002	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	3440	86.657646	1
CGTAGGG	305	84.76326	2
AGGGTAC	285	79.16166	5
GGGCGAT	225	77.287895	6
AGGGATG	1385	76.69679	5
TAAACGG	80	76.40635	1
GCGTAGG	210	76.12647	1
TAGGGCG	75	75.203575	4
AGGGAAT	1155	74.47107	5
GAATAGG	460	73.59541	1
CGAAGGG	785	73.052475	2
GAAGGGC	1140	72.98157	3
ACGCGGG	200	72.85787	2
AAGGGAT	1575	72.81617	4
TAAGAGG	705	72.696495	1
GGTAAGG	395	72.612076	1
GAGGGAT	1030	72.556854	4
AGGGATT	810	71.95404	5
CAGGGAT	560	71.34268	4
ACGGGGA	385	70.80856	4