SRR3127761.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127761.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1400520
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16277	1.1622111787050524	No Hit
GCTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGCCGTCTTCTG	5400	0.3855710736012338	No Hit
CCTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGCCGTCTTCTG	5164	0.36872018964384656	No Hit
CTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGCCGTCTTCTGC	4661	0.33280495815839833	No Hit
AGCTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGCCGTCTTCT	1943	0.1387341844457773	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	1628	0.1162425384857053	No Hit
AGAGCTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGCCGTCTT	1625	0.11602833233370462	No Hit
AAAGCTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGCCGTCTT	1493	0.10660326164567445	No Hit
ACTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGCCGTCTTCTG	1418	0.10124810784565733	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ATAGCGG	200	84.67519	1
CGTTTTT	5435	84.56267	1
ACGGGAT	765	82.937836	4
CGAAGGG	1375	82.37487	2
CGTAGGG	400	82.24669	2
ACGGGTA	150	81.46339	4
AGTAGGG	2105	80.15354	2
AGGGATG	2810	78.10717	5
GTAGGGA	1400	77.882576	3
TAGGGCA	1095	77.68637	4
TAAGGGA	1785	77.145355	3
TAGGGAT	1665	76.21315	4
GTAGGGT	310	75.8034	3
GAGGGAT	2705	75.579216	4
TAGCGGG	710	75.461754	2
AGGGATT	2215	75.32429	5
AGGGCAT	1315	75.054016	5
AGGGAAT	2110	74.39511	5
AAGGGAC	1540	73.54899	4
AAGGGAT	3745	73.54043	4