SRR3127576.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127576.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2030917
Sequences flagged as poor quality	0
Sequence length	100
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16882	0.8312501200196758	No Hit
GCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTG	5972	0.29405436066565005	No Hit
CCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTG	5306	0.26126129231278283	No Hit
CTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTGC	5205	0.256288169334345	No Hit
AGCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCT	2580	0.12703621073633242	No Hit
AGAGCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTT	2376	0.11699148709671543	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	2313	0.11388944009036311	No Hit
AAAGCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTT	2265	0.11152597570457089	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	5350	84.67	1
ACGGGTA	275	83.742516	4
GTACGGG	300	83.03042	2
CGTAGGG	515	80.30786	2
ATAGCGG	405	77.81742	1
TACGGGT	145	77.78846	3
CGAAGGG	1820	77.46981	2
TAGGGCA	1595	76.906395	4
AGGGATG	3565	76.72662	5
CGGGTAA	175	75.19736	5
AGGGCAT	2740	74.95722	5
ATAACGG	260	74.17671	1
AAGGGCA	3945	73.98219	4
GAATAGG	1470	73.91825	1
AGGGATC	2540	73.828125	5
ATAGGGA	2990	73.56082	3
CGAGGGA	1470	73.53303	3
ATTGCGG	315	73.17161	1
AAGGGAT	5520	73.136925	4
TAGCGGG	900	73.10854	2