SRR3127524.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127524.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	12596328
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	501427	3.980739466295257	No Hit
CGCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTCT	25558	0.20290040081522173	No Hit
CGTTCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTT	20430	0.16219012397898816	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCT	20150	0.1599672539489286	No Hit
CCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTCTG	19290	0.1531398674280314	No Hit
GAGCAGGAGGCTGACAATGAGGTAGACGAAGAAGAGGAAGAAGGTGGGGA	14500	0.11511291227094117	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	14122	0.11211203773036078	No Hit
CTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTCTGC	13006	0.10325231289626628	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	138550	90.675354	1
ATAGGGC	5830	71.416626	3
TAGTAGG	4025	69.55388	1
GTTTTTT	183520	68.94355	2
GGTAAGG	7205	68.880325	1
AGTAGGG	18280	68.434395	2
AGATAGG	6690	67.70146	1
GAATAGG	7255	67.56111	1
AAGGGGC	45220	67.22241	4
ATAGGGA	6810	67.15645	3
TAGGGCA	3905	67.060905	4
ATAGAGG	7950	66.990326	1
GATAGGG	17095	66.510574	2
TAGAGGG	22290	65.7374	2
GGATAGG	6695	65.53902	1
AATAGGG	15865	65.254456	2
AGGGGCT	56985	64.936035	5
TATAGGG	8785	64.498024	2
AGTAAGG	7465	64.39782	1
AGGGACT	15310	64.33791	5