SRR3127523.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127523.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8607139
Sequences flagged as poor quality	0
Sequence length	100
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	306198	3.5574887311567758	No Hit
CGCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTCT	24888	0.2891553163019675	No Hit
CGTTCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTT	21455	0.24926982124954647	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCT	20355	0.2364897325348179	No Hit
CCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTCTG	18678	0.21700590637609082	No Hit
CTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTCTGC	13051	0.1516299434690203	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTC	9947	0.11556685676854991	No Hit
CGTCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTC	9559	0.11105897093099112	No Hit
GAGCAGGAGGCTGACAATGAGGTAGACGAAGAAGAGGAAGAAGGTGGGGA	8843	0.10274029500394963	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	88340	90.70233	1
ATAGGGC	4100	73.018	3
TAGTAGG	2635	70.67183	1
GTTTTTT	116430	69.053925	2
AGTAGGG	12595	67.98758	2
ATAGAGG	5295	67.94027	1
GGATAGG	4825	67.83342	1
GAATAGG	4625	67.51311	1
TATAGGG	5490	67.02994	2
AAGGGGC	30365	66.95454	4
GTATAGG	2605	66.792206	1
AGATAGG	4315	66.587425	1
GGTAAGG	4610	66.5087	1
AGTAAGG	4925	66.3606	1
AATAGGG	9960	65.77833	2
ATAGGGA	4135	64.898544	3
GATAGGG	11755	64.769684	2
TGTAGGG	5550	64.526985	2
AGGGGCT	37965	64.09777	5
TAGAGGG	15150	63.563637	2