SRR3127522.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127522.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	12653642
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	472116	3.7310680988129743	No Hit
CGCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTCT	26407	0.20869090495843015	No Hit
CGTTCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTT	20758	0.16404763150403653	No Hit
CCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTCTG	20080	0.15868949034594151	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCT	19912	0.15736180935101532	No Hit
GAGCAGGAGGCTGACAATGAGGTAGACGAAGAAGAGGAAGAAGGTGGGGA	14414	0.11391186821944228	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	13938	0.1101501054004847	No Hit
CTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTCTGC	13488	0.10659381702121808	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	135620	90.19893	1
ATAGGGC	5845	72.60503	3
TAGTAGG	4235	70.4484	1
ATAGAGG	8145	69.73511	1
GGTAAGG	7270	68.28941	1
GTTTTTT	181180	68.09712	2
GGATAGG	7005	67.446724	1
AGTAGGG	19265	67.09614	2
AAGGGGC	46995	66.99182	4
TATAGGG	8730	65.92633	2
ATAGGGA	6915	65.92392	3
GAATAGG	7165	65.74355	1
GTATAGG	4360	65.62244	1
TAGAGGG	23040	65.49061	2
AATAGGG	15465	65.06622	2
AGGGGCT	58285	64.84414	5
AGATAGG	6240	64.70502	1
GATAGGG	17180	64.51017	2
TAGGGCA	3840	64.25272	4
AGTAAGG	7400	64.0373	1