SRR3127496.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127496.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1159550
Sequences flagged as poor quality	0
Sequence length	100
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	18732	1.6154542710534256	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	8272	0.7133801905911776	No Hit
CTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGC	5279	0.45526281747229524	No Hit
CCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTG	4379	0.3776465007977233	No Hit
GCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTG	3542	0.30546332629037126	No Hit
CGCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCT	2076	0.1790349704626795	No Hit
GGTACTGAACCTACGAGTACACCGACTACGGCGGACTAATCTTCAACTCC	1564	0.13487991031003407	No Hit
AGCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCT	1301	0.1121986977706869	No Hit
TCCGCTACGACCAACTCATACACCTGTCTCTTATACACATCTGACGCGCT	1280	0.11038765038161356	No Hit
GAATCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTT	1219	0.10512698891811478	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	7480	88.50453	1
CGCTACG	1540	87.59807	3
TCCGCTA	1565	86.82564	1
CTACGAC	1555	86.45078	5
GGATGGC	2400	83.827126	7
ACGACCA	1590	83.3689	7
GCTACGA	1620	82.98208	4
TACGACC	1615	82.94795	6
CGACCAA	1615	81.49625	8
AGGGATG	3060	81.10466	5
GCGGGAT	535	80.82903	4
GATGGCA	2295	80.28889	8
CCGCTAC	1725	78.472595	2
AGGGAAT	2425	77.72594	5
GGAATGC	1505	77.45817	7
AACGGGA	560	77.22059	3
CGGGAAT	500	77.086296	5
CGAGGGA	880	76.915375	3
CGAAGGG	860	76.51458	2
AGCGGGA	770	76.30493	3