SRR3127495.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127495.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1069572
Sequences flagged as poor quality	0
Sequence length	100
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14852	1.3885928203056923	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	7166	0.669987621216711	No Hit
CTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGC	6207	0.580325588179197	No Hit
CCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTG	5277	0.49337492006148254	No Hit
GCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTG	4630	0.43288343374733074	No Hit
CGCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCT	2486	0.23242942036627734	No Hit
AGCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCT	1737	0.16240140916179557	No Hit
TCCGCTACGACCAACTCATACACCTGTCTCTTATACACATCTGACGCGCT	1559	0.14575923827474915	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCGCTTAACA	1441	0.13472678791142625	No Hit
GAATCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTT	1419	0.13266989038606097	No Hit
GGTACTGAACCTACGAGTACACCGACTACGGCGGACTAATCTTCAACTCC	1349	0.12612521644171687	No Hit
TAGACCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCT	1257	0.11752364497200748	No Hit
GGCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCT	1246	0.11649519620932486	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCC	1242	0.11612121484107661	No Hit
AAAGCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTT	1197	0.11191392444828399	No Hit
GAACCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTT	1163	0.108735082818174	No Hit
AGAGCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTT	1136	0.10621070858249841	No Hit
ACCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCT	1113	0.10406031571507109	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCTACG	1255	90.85575	3
TCCGCTA	1315	89.62711	1
CTACGAC	1290	88.523575	5
CGTTTTT	5745	88.37936	1
GCTACGA	1315	86.71025	4
TACGACC	1325	86.18521	6
CGACCAA	1325	84.766525	8
ACGACCA	1360	82.93057	7
GGATGGC	2225	81.94907	7
GCGGGAT	575	81.94321	4
AGGGATG	2745	80.9769	5
CGAAGGG	735	80.77258	2
CCGCTAC	1475	79.8599	2
TAGGGCA	690	79.21176	4
CGTAGGG	155	79.03554	2
TAAGCGG	215	78.93855	1
GATGGCA	2110	78.842995	8
CGGGATG	565	78.18469	5
CGAGGGA	680	77.605034	3
AGGGTAC	445	77.09127	5