SRR3127467.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127467.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2112447
Sequences flagged as poor quality	0
Sequence length	100
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	24554	1.162348688511475	No Hit
CTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGC	2707	0.1281452268388272	No Hit
GCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTG	2588	0.12251194941222195	No Hit
CCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTG	2533	0.11990833379488337	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	7195	85.8622	1
TAGGGCA	1155	73.24105	4
CGTAGGG	555	72.019	2
ATAGGGC	1270	71.789696	3
AGTAGGG	3525	71.10322	2
ATAGGGA	1855	70.684525	3
AGGGATG	2785	69.86171	5
AGGGCAT	1985	69.36992	5
GTAGGGA	1710	67.883606	3
GAATAGG	1250	67.75332	1
AGGGAAT	2175	67.631516	5
GGTAAGG	1240	67.540825	1
CGAAGGG	2165	67.33253	2
AGAGGGC	2620	67.08638	3
ATAAGGG	2875	66.56987	2
AAGAGGG	7610	66.48884	2
AATAGGG	2935	66.170296	2
CGAGGGA	1145	65.26129	3
GAGGGAT	2330	65.14944	4
AAGGGGC	5775	64.859024	4