SRR3127466.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127466.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	576127
Sequences flagged as poor quality	0
Sequence length	100
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9681	1.6803586709180443	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	6624	1.1497464968661424	No Hit
CCTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGCCGTCTTCTG	1752	0.3040996169247405	No Hit
CTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGCCGTCTTCTGC	1633	0.2834444488801948	No Hit
GCTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGCCGTCTTCTG	1477	0.2563670857293618	No Hit
GGTACTGAACCTACGAGTACACCGACTACGGCGGACTAATCTTCAACTCC	814	0.14128829233832124	No Hit
TCCGCTACGACCAACTCATACACCTGTCTCTTATACACATCTGACGCATG	768	0.1333039416656397	No Hit
TAGACCTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGCCGTCT	690	0.11976526009022316	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA	661	0.11473164770961959	No Hit
CGCTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGCCGTCTTCT	587	0.10188725749704491	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCCGTT	15	6.898298E-4	94.00738	9
CGCTACG	900	0.0	89.32252	3
CGTTTTT	3805	0.0	87.59895	1
CTACGAC	930	0.0	86.44115	5
GCTACGA	930	0.0	86.44115	4
CTAGCGG	60	0.0	86.1884	1
ACGACCA	930	0.0	85.43756	7
CGACCAA	950	0.0	84.13378	8
GGTAAGG	215	0.0	83.09071	1
AGGGATG	1470	0.0	82.83041	5
TACGACC	975	0.0	82.45156	6
TCCGCTA	995	0.0	82.21168	1
TAGGGTA	190	0.0	81.65216	4
ATAGCGG	150	0.0	81.487206	1
AGGGCGT	110	0.0	81.20229	5
CGTAGGG	145	0.0	81.04788	2
AGGGTAC	215	0.0	80.90412	5
GCATAGG	105	0.0	80.59174	1
AAGGGCA	725	0.0	80.40648	4
CGGGAAT	240	0.0	80.31191	5