SRR3127450.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127450.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1001682
Sequences flagged as poor quality	0
Sequence length	100
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12625	1.2603800407714225	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	9699	0.9682713675597645	No Hit
CTGTCTCTTATACACATCTGACGCCTAGGAATTCGTATGCCGTCTTCTGC	3360	0.33543579698946374	No Hit
CCTGTCTCTTATACACATCTGACGCCTAGGAATTCGTATGCCGTCTTCTG	3255	0.324953428333543	No Hit
GCTGTCTCTTATACACATCTGACGCCTAGGAATTCGTATGCCGTCTTCTG	3246	0.3240549395916069	No Hit
TCCGCTACGACCAACTCATACACCTGTCTCTTATACACATCTGACGCCTA	1790	0.1786994275628393	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCCTAGGAAT	1338	0.13357532630116145	No Hit
TAGACCTGTCTCTTATACACATCTGACGCCTAGGAATTCGTATGCCGTCT	1276	0.12738573719004634	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA	1123	0.11211142857713327	No Hit
AGCTGTCTCTTATACACATCTGACGCCTAGGAATTCGTATGCCGTCTTCT	1094	0.10921629818645039	No Hit
CGCTGTCTCTTATACACATCTGACGCCTAGGAATTCGTATGCCGTCTTCT	1058	0.10562234321870613	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	5355	87.142654	1
GTAGCGG	115	86.161934	1
AGGGATG	2810	85.1228	5
CGCTACG	1745	84.0044	3
ACGGGTA	125	82.95638	4
TCCGCTA	1805	82.08172	1
TAGGGCA	580	82.078705	4
ACGACCA	1765	82.00502	7
AGTACGG	75	81.78546	1
CTACGAC	1815	81.040504	5
GCTACGA	1805	80.95088	4
GGATGGC	2440	80.88983	7
CGAAGGG	665	80.80167	2
CGGGTAT	105	80.55966	5
AGGGTAC	530	79.79966	5
GAGGGAT	2315	79.60913	4
CGACCAA	1820	79.52685	8
GCGGGAT	485	78.71915	4
AAGGGTA	685	78.4425	4
TAAGGGA	1255	78.119	3