SRR3127235.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127235.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	555687
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7735	1.391970659741905	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	4217	0.7588804488857936	No Hit
CTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTCTTCTGC	2507	0.45115325713936083	No Hit
CCTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTCTTCTG	2034	0.3660333964983885	No Hit
GCTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTCTTCTG	1661	0.2989092780648099	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA	1274	0.22926575572219612	No Hit
GAATCTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTCTT	780	0.1403667892176711	No Hit
AGCTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTCTTCT	614	0.1104938571533975	No Hit
TCCGCTACGACCAACTCATACACCTGTCTCTTATACACATCTGACGCATT	593	0.10671475128984481	No Hit
GGTACTGAACCTACGAGTACACCGACTACGGCGGACTAATCTTCAACTCC	590	0.10617487902362302	No Hit
CGCTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTCTTCT	563	0.10131602862762669	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	4230	0.0	88.273605	1
CGTAGGG	75	0.0	87.74493	2
CTAGCGG	65	0.0	86.81976	1
AGGGATG	1320	0.0	85.82194	5
CGCTACG	685	0.0	85.09153	3
TCCGCTA	730	0.0	82.458954	1
CATGCGG	40	1.029548E-9	82.2979	1
AGGGCAT	480	0.0	82.26087	5
GCTACGA	720	0.0	80.30228	4
CTACGAC	725	0.0	79.74847	5
GGATGGC	1075	0.0	79.14533	7
TAAGGGA	530	0.0	78.93496	3
GTAAAGG	370	0.0	78.80263	1
ACGACCA	710	0.0	78.78505	7
CTAACGG	30	1.4501184E-6	78.37896	1
AGGGAAT	1020	0.0	78.34368	5
AAGGGCA	745	0.0	78.238525	4
CGAAGGG	415	0.0	78.1549	2
AAGGGAT	1425	0.0	77.51902	4
AGTACGG	55	1.8189894E-12	76.95388	1