SRR3127232.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127232.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	10388969
Sequences flagged as poor quality	0
Sequence length	100
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	442249	4.2569094199819055	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	42980	0.4137080397486988	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCT	26727	0.25726325682558104	No Hit
CGTTCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTT	24373	0.2346046080222205	No Hit
CGCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCT	22877	0.22020471906307545	No Hit
GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	17081	0.1644147749406125	No Hit
AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	16101	0.1549816926010656	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTC	12424	0.11958838263931677	No Hit
CCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCTG	11660	0.11223442865215981	No Hit
GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11445	0.1101649258939939	No Hit
CGTCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTC	11185	0.10766227139574677	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	121035	90.81892	1
AGGGACT	22815	69.725136	5
GACTTAA	17830	69.26681	8
GGATAGG	5340	68.930695	1
AGTAGGG	14565	68.71999	2
GTTTTTT	162385	67.917694	2
ATAGGGC	4480	67.91769	3
ATAGGGA	6025	67.6219	3
ACTTAAT	18265	67.46277	9
TAGTAGG	3225	67.22504	1
AGATAGG	5225	66.65934	1
GGACTTA	18745	66.56259	7
GATAGGG	13845	66.34013	2
GGTAAGG	5675	66.2735	1
ATAGAGG	6730	65.898796	1
AAGGGGC	35380	65.725464	4
GTAGGGA	6685	65.17315	3
AATAGGG	12555	64.265114	2
TAGGGAC	4290	63.899	4
AGTAAGG	6230	63.77382	1