SRR3127231.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127231.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6976889
Sequences flagged as poor quality	0
Sequence length	100
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	264663	3.7934242611570856	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCT	26296	0.3769015101143217	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	25713	0.3685453502270138	No Hit
CGTTCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTT	24917	0.35713625370849383	No Hit
CGCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCT	21697	0.3109838783446318	No Hit
CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCC	17726	0.25406739307447773	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTC	12191	0.17473403977044782	No Hit
CCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCTG	10883	0.1559864289083573	No Hit
CGTCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTC	10841	0.15538444140361127	No Hit
GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	10086	0.14456299935401007	No Hit
AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	9396	0.1346732046331825	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	76830	90.8238	1
AGGGACT	13935	71.83484	5
GACTTAA	11360	69.99681	8
ATAGGGC	2860	69.509315	3
ACTTAAT	11385	69.471596	9
GGATAGG	3410	69.23161	1
TAGTAGG	2000	68.42552	1
GTTTTTT	102770	67.950386	2
TAGGGAC	2620	67.80412	4
AGTAGGG	9510	67.55488	2
GGACTTA	11985	67.36706	7
AAGGGGC	23360	66.269905	4
AGATAGG	3375	65.90866	1
GGTAAGG	3545	65.799194	1
GATAGGG	8815	64.93722	2
AATAGGG	7890	64.33028	2
AGTAAGG	4075	64.28101	1
CAGGGAC	13245	63.761967	4
ATAGAGG	4360	63.746468	1
ATAGGGA	3705	63.677235	3