SRR3127229.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127229.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	12352741
Sequences flagged as poor quality	0
Sequence length	100
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

N content graph

Sequence length distribution

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	520099	4.210393466518888	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	52610	0.4258973777560786	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCT	29410	0.23808481048861949	No Hit
CGTTCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTT	26534	0.21480252844287756	No Hit
CGCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCT	23199	0.18780447189818034	No Hit
GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	21041	0.17033466499459513	No Hit
AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	19914	0.16121118381742158	No Hit
CCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCTG	14767	0.11954431813959347	No Hit
GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14528	0.11760952488196749	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTC	14110	0.11422566052344171	No Hit
CGTCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTC	12731	0.10306214628801819	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	142495	90.58899	1
ATAGGGC	5520	71.63137	3
AGGGACT	28190	71.48253	5
GACTTAA	22710	70.14927	8
ACTTAAT	22870	69.165344	9
ATAGAGG	8160	68.50341	1
GGACTTA	23510	68.46183	7
AGTAGGG	16895	68.07377	2
GGTAAGG	6250	67.83138	1
GTTTTTT	192335	67.47334	2
ATAGGGA	7455	67.22888	3
GGATAGG	6450	67.114136	1
AGATAGG	5960	66.94767	1
AAGGGGC	42015	66.180275	4
TAGGGAC	5285	65.47634	4
GATAGGG	16195	65.20942	2
GTATAGG	3550	65.07873	1
GTAGGGA	8015	64.643425	3
TATAGGG	8160	64.24898	2
AATAGGG	15825	64.17879	2