SRR3127185.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127185.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	747351
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

$Per sequence GC content graph$

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10150	1.3581302493741227	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	4076	0.545392994724032	No Hit
GCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTG	2535	0.33919804750378335	No Hit
CCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTG	1980	0.26493575307987816	No Hit
CTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGC	1956	0.2617244106183038	No Hit
GGTACTGAACCTACGAGTACACCGACTACGGCGGACTAATCTTCAACTCC	1267	0.16953212078394223	No Hit
AAAGCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTT	1102	0.14745414136061902	No Hit
CGCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCT	814	0.10891803182172767	No Hit
GGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAAGGCATTGGTAT	753	0.10075586973189304	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTAGGG	205	0.0	89.4014	2
CGTTTTT	3160	0.0	87.35833	1
TAGGGCG	210	0.0	82.80835	4
GCTACGA	720	0.0	82.24883	4
AGGGCAT	700	0.0	81.2417	5
GGATTCG	35	3.8631697E-8	80.570274	7
CGCTACG	740	0.0	80.02054	3
ACGGGTG	125	0.0	78.95888	4
TAGACGG	60	0.0	78.37942	1
GACCGAT	30	1.4557645E-6	78.332214	8
AGGGAAT	1715	0.0	78.10384	5
GTAGGGA	730	0.0	77.89779	3
AGGGATG	1820	0.0	77.47143	5
TCCGCTA	760	0.0	77.348114	1
TGTAGGG	565	0.0	76.519646	2
ACGACCA	775	0.0	76.41182	7
GGATGGC	1435	0.0	76.3125	7
GTAGGGC	345	0.0	76.28366	3
ACGGGAT	255	0.0	75.56755	4
GGATGAC	840	0.0	75.53464	7