SRR3127183.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127183.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	624416
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7828	1.2536514118792599	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	3051	0.4886165633167632	No Hit
GCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTG	2444	0.39140572951365754	No Hit
CCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTG	2010	0.32190078409265616	No Hit
CTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGC	1978	0.31677599549018604	No Hit
AAAGCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTT	1058	0.1694383231691693	No Hit
GGTACTGAACCTACGAGTACACCGACTACGGCGGACTAATCTTCAACTCC	1009	0.16159099062163687	No Hit
CGCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCT	809	0.12956106185619845	No Hit
AGCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCT	712	0.1140265464049608	No Hit
GGCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCT	644	0.10313637062471175	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGGGTC	15	6.9044635E-4	93.98718	4
TAGTGCG	15	6.9044635E-4	93.98718	9
CGTTTTT	2560	0.0	86.741684	1
AGGGCAT	605	0.0	80.78238	5
TAGCGGG	240	0.0	80.332184	2
CGTAGGG	135	0.0	80.11448	2
CGAAGGG	520	0.0	79.5786	2
GCGGGTA	125	0.0	78.949234	4
ACGGGAT	275	0.0	78.60747	4
TCCGCTA	545	0.0	78.554436	1
CTAGCGG	60	0.0	78.41056	1
AGGGATG	1590	0.0	78.322655	5
GCTACGA	535	0.0	78.17626	4
GTAGGGC	295	0.0	78.05716	3
GGATGGC	1265	0.0	77.270096	7
GACGGGT	55	1.8189894E-12	76.898605	3
GGAATGC	700	0.0	76.532425	7
AGGGAAT	1190	0.0	76.21651	5
CGCTACG	565	0.0	75.6888	3
AAGGGTA	485	0.0	75.577324	4