SRR3127176.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127176.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1838542
Sequences flagged as poor quality	0
Sequence length	100
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	19633	1.0678570301902268	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	7715	0.41962598624344727	No Hit
GCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTG	6110	0.33232855164581504	No Hit
CCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTG	5764	0.3135092916017148	No Hit
CTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC	5683	0.30910362667809604	No Hit
AAAGCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTT	2564	0.1394583316562798	No Hit
GGTACTGAACCTACGAGTACACCGACTACGGCGGACTAATCTTCAACTCC	2200	0.11966003496248659	No Hit
AGCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCT	2182	0.1186809983127935	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TAGGGCG	230	87.86375	4
CGTTTTT	6340	85.2815	1
ATAGCGG	440	84.415215	1
AGGGATG	5065	83.87993	5
CTAACGG	130	83.18227	1
TCCGCTA	1570	78.7594	1
ACGGGAT	645	78.69247	4
CTACGAC	1585	78.57523	5
TAGCGGG	970	78.48965	2
CGAGGGA	1295	78.02572	3
CGAAGGG	1440	78.00178	2
TACGACC	1600	77.54486	6
GGATGGC	3690	77.30924	7
CGCTACG	1605	77.01047	3
TAACGGG	410	76.79979	2
GCTACGA	1630	76.11765	4
TAAGGGA	2555	75.59969	3
AAGGGAT	5075	75.47283	4
CGTAGGG	490	74.81137	2
TACGAGG	340	74.67258	1