SRR3127175.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127175.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1484934
Sequences flagged as poor quality	0
Sequence length	100
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14180	0.9549245959753092	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	5943	0.4002198077490313	No Hit
GCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTG	5565	0.3747641309310717	No Hit
CCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTG	5015	0.33772544773033686	No Hit
CTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC	4845	0.3262771274682915	No Hit
AAAGCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTT	2183	0.14700990077673484	No Hit
AGCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCT	1961	0.13205974137571097	No Hit
GGTACTGAACCTACGAGTACACCGACTACGGCGGACTAATCTTCAACTCC	1695	0.11414648731862831	No Hit
CGCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCT	1692	0.11394445813753339	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	4600	85.28767	1
CGAAGGG	1140	81.849686	2
AGGGATG	4410	81.41342	5
CGCTACG	1225	80.786705	3
GCTACGA	1210	80.6198	4
CGAGGGA	1080	79.85167	3
ACGGGAT	535	79.27668	4
ATAGCGG	375	79.21912	1
CTACGAC	1225	79.02643	5
CGTAGGG	340	79.00465	2
TCCGCTA	1265	78.65253	1
GCGTAGG	120	78.59039	1
TACGACC	1235	78.38654	6
TAAGGGA	1860	77.02245	3
AGGGAAT	2625	76.08531	5
AAGGGAT	3725	75.906975	4
GGTAAGG	905	75.55099	1
GGATGGC	3060	75.251625	7
GCGGGAT	835	74.49792	4
CTAGCGG	95	74.45406	1