SRR3127174.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127174.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1554925
Sequences flagged as poor quality	0
Sequence length	100
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14928	0.9600463044841391	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	6146	0.39526022155409424	No Hit
GCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTG	5565	0.35789507532517645	No Hit
CCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTG	4906	0.3155136099811888	No Hit
CTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC	4743	0.30503078926636334	No Hit
AAAGCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTT	2294	0.1475312314098751	No Hit
AGCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCT	1855	0.1192983584417255	No Hit
GGTACTGAACCTACGAGTACACCGACTACGGCGGACTAATCTTCAACTCC	1854	0.11923404665819895	No Hit
CGCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCT	1751	0.11260993295496566	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	5030	85.309074	1
AGGGATG	4225	83.425705	5
CTAGCGG	120	82.339165	1
ACGGGAT	630	79.81941	4
GCGTAGG	190	79.2437	1
CTACGAC	1255	79.014	5
GGATGGC	3035	78.50812	7
CGAAGGG	1100	78.212715	2
CGCTACG	1265	78.01787	3
TACGACC	1275	77.77456	6
TCCGCTA	1295	77.752144	1
AAGGGAT	4055	76.84011	4
CGAGGGA	1165	76.646614	3
GCTACGA	1295	76.57341	4
ACGGGTA	210	76.08954	4
GAGGGAT	3095	75.77138	4
GCGGGAT	895	75.61445	4
AAGGGCG	530	75.37171	4
CGTAGGG	395	74.98293	2
ACGACCA	1285	74.97493	7