SRR3127173.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127173.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1331274
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17956	1.3487831956456748	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	8749	0.657190030001337	No Hit
GCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTG	4434	0.3330644179935911	No Hit
CCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTG	4111	0.30880194460344	No Hit
CTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGC	3804	0.2857413274802933	No Hit
AAAGCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTT	1728	0.12980047683647394	No Hit
GGTACTGAACCTACGAGTACACCGACTACGGCGGACTAATCTTCAACTCC	1660	0.12469258770170528	No Hit
TCCGCTACGACCAACTCATACACCTGTCTCTTATACACATCTGACGCGAC	1589	0.11935935051687332	No Hit
AGCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCT	1376	0.10335963896237739	No Hit
CGCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCT	1340	0.10065546236161751	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	5340	87.51281	1
CTACGAC	1630	85.34611	5
CGCTACG	1630	85.05778	3
GCTACGA	1645	84.002785	4
TCCGCTA	1695	83.76521	1
ACGACCA	1630	83.32779	7
AGGGATG	3625	81.93863	5
ACGGGAT	450	79.38041	4
GGAATGC	2060	78.48214	7
AAGGGAT	3350	78.28916	4
AAGGGTA	980	78.17606	4
GGTAAGG	560	78.0767	1
CGACCAA	1740	78.059944	8
CGTAGGG	285	77.50552	2
TACGACC	1795	77.50092	6
CCGCTAC	1845	77.438484	2
AGGGCGT	170	77.40852	5
TAAGGGA	1705	76.90586	3
TACGGGA	270	76.58938	3
TAGGGCA	780	76.52818	4