SRR3127172.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127172.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1080888
Sequences flagged as poor quality	0
Sequence length	100
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12704	1.1753299139226265	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	6496	0.6009873363382701	No Hit
GCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTG	3936	0.36414503630348377	No Hit
CCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTG	3415	0.31594392758546674	No Hit
CTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGC	3273	0.3028065812554122	No Hit
TCCGCTACGACCAACTCATACACCTGTCTCTTATACACATCTGACGCGAC	1510	0.13969995041114344	No Hit
AAAGCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTT	1448	0.13396392595717596	No Hit
CGCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCT	1301	0.12036399700986597	No Hit
GGTACTGAACCTACGAGTACACCGACTACGGCGGACTAATCTTCAACTCC	1234	0.11416538993864304	No Hit
AGCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCT	1154	0.10676406806255598	No Hit
GGCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCT	1113	0.10297089060106136	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGTAGG	90	89.034485	1
CGTTTTT	4055	86.83235	1
GCTACGA	1195	83.9968	4
CTACGAC	1200	83.41465	5
CGCTACG	1210	82.95553	3
TACGGGA	250	82.93995	3
TCCGCTA	1220	82.68101	1
ACGACCA	1190	81.74616	7
ATAGCGG	150	81.70223	1
ACGGGAT	500	81.054955	4
AGGGATG	2995	80.80801	5
CGTAGGG	245	80.78567	2
AGGGAAT	2320	79.80907	5
TAGGGCA	505	79.31926	4
TAAGGGA	1285	78.4805	3
TAGGGCG	230	77.85865	4
GTACGGG	200	77.7562	2
CGAAGGG	770	77.7256	2
AAGGGTA	745	77.17109	4
GGAATGC	1645	77.133286	7