SRR3127163.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127163.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1591345
Sequences flagged as poor quality	0
Sequence length	100
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	13172	0.827727488382469	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	5987	0.3762226292852901	No Hit
GCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTG	5475	0.3440485878297918	No Hit
CCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTG	4415	0.27743826762895535	No Hit
CTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGC	4285	0.26926907741564526	No Hit
AAAGCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTT	2503	0.15728833156857877	No Hit
AGCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCT	1853	0.11644238050202815	No Hit
GGTACTGAACCTACGAGTACACCGACTACGGCGGACTAATCTTCAACTCC	1743	0.10952998878307343	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	4865	84.47922	1
ACGGGTA	235	82.19669	4
AGGGATG	3430	79.19158	5
AGGGAAT	2805	78.74269	5
AGTAAGG	955	78.471146	1
GGTACGA	60	78.32385	7
TAGGGCA	1145	78.17834	4
CGAAGGG	1085	77.72761	2
GTACGGG	310	77.5105	2
CGTAGGG	335	77.35171	2
CGAGGGA	1140	77.28142	3
AAGGGCG	810	76.77631	4
GAAGGGC	2250	76.42732	3
TAACGGG	650	76.1076	2
GGTAAGG	925	74.90173	1
AAGGGCA	2910	74.47375	4
AGGGTAC	765	74.33087	5
CGCTACG	1180	74.26246	3
TAGCGGG	565	74.215324	2
AAGGGAT	3365	74.06431	4