SRR3127162.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127162.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1650796
Sequences flagged as poor quality	0
Sequence length	100
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	13836	0.8381411149530288	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	6183	0.37454658237601735	No Hit
GCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTG	5521	0.33444471636713435	No Hit
CCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTG	4404	0.26678038958175326	No Hit
CTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGC	4377	0.26514481498622483	No Hit
AAAGCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTT	2484	0.15047286278861835	No Hit
GGTACTGAACCTACGAGTACACCGACTACGGCGGACTAATCTTCAACTCC	1955	0.1184277160836348	No Hit
AGCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCT	1777	0.10764503912052126	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	5110	85.08951	1
ACGGGTA	295	84.43311	4
CGTAGGG	370	78.78789	2
TAGGGCA	1270	78.07962	4
AGGGATG	3965	77.990486	5
GAAGGGC	2340	75.71544	3
AGGGAAT	2605	75.59016	5
GTAGGGT	510	75.56186	3
TAGGGTA	535	75.54463	4
CGAAGGG	1255	74.93	2
AAGGGAT	3630	74.701294	4
ATAGCGG	215	74.41585	1
AGGGTAT	1220	74.3458	5
CGAGGGA	1130	74.02877	3
GAACGGG	820	73.96825	2
AGGGAAC	1705	73.87022	5
TAGGGCG	325	73.74724	4
CGCTACG	1275	73.71888	3
GTAGGGC	875	73.58198	3
TAAGGGA	1810	73.47961	3