SRR3127149.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127149.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1445865
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17762	1.228468771289159	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	10112	0.6993737312957987	No Hit
GCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCTG	4747	0.3283155757971871	No Hit
CCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCTG	4088	0.2827373233323996	No Hit
CTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCTGC	3758	0.25991361572484295	No Hit
AAAGCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTT	2571	0.17781743108796463	No Hit
GGTACTGAACCTACGAGTACACCGACTACGGCGGACTAATCTTCAACTCC	2177	0.15056730745954844	No Hit
TCCGCTACGACCAACTCATACACCTGTCTCTTATACACATCTGACGCCTC	1860	0.1286427156062288	No Hit
AGCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCT	1629	0.1126661202809391	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTAGGG	290	85.89099	2
CGTTTTT	5630	85.097305	1
TCCGCTA	1880	84.029434	1
AGGGATG	3610	83.19139	5
CGCTACG	1900	82.86305	3
ACGGGAT	805	82.3205	4
TAGGGCG	200	82.24751	4
GGGCGAT	425	80.726974	6
CTACGAC	1940	80.1883	5
CGAAGGG	1180	80.05413	2
GCTACGA	1960	79.370056	4
ATAGCGG	285	79.18563	1
GATGACC	2090	78.031136	8
TACGACC	2010	77.395676	6
CGGGATG	1035	77.19574	5
GGATGGC	2935	77.02323	7
CGACCAA	1965	76.77631	8
ACGACCA	2005	75.47902	7
AAGGGAT	3805	75.22244	4
AGGGTAT	1155	74.8722	5