SRR3127143.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127143.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2610467
Sequences flagged as poor quality	0
Sequence length	100
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	25913	0.9926576355878087	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	7036	0.2695303177554054	No Hit
GCTGTCTCTTATACACATCTGACGCGTACTCGGTCGTATGCCGTCTTCTG	3962	0.15177360985601426	No Hit
CCTGTCTCTTATACACATCTGACGCGTACTCGGTCGTATGCCGTCTTCTG	3544	0.13576114925030655	No Hit
CTGTCTCTTATACACATCTGACGCGTACTCGGTCGTATGCCGTCTTCTGC	3094	0.11852285433985565	No Hit
GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2712	0.10388945732698403	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	8115	82.09716	1
CGTAGGG	800	75.19698	2
TAGGGCG	500	72.37987	4
ATAGGGC	1575	71.91457	3
TAGGGCA	1200	71.674866	4
AGGGCAT	2330	70.39901	5
ATAGGGA	2650	70.23115	3
AGGGACT	4470	68.1341	5
ATAAGGG	3490	67.8712	2
GTAAGGG	4130	67.82294	2
AGTAGGG	4345	67.82006	2
ACGGGAT	585	67.48705	4
TAAGGGA	2315	67.19817	3
GTAGGGC	1060	66.95014	3
AGGGATG	3645	66.921684	5
GTACGGG	605	66.807236	2
ATGAGGG	3780	66.76716	2
ATAGAGG	1870	66.12428	1
AGGGTAT	1395	66.03572	5
CGAAGGG	2650	65.79736	2