SRR3127107.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127107.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	988217
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14406	1.457776986228733	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	8135	0.823199762805133	No Hit
GCTGTCTCTTATACACATCTGACGCTCCCATGGTCGTATGCCGTCTTCTG	3679	0.37228665363983826	No Hit
CCTGTCTCTTATACACATCTGACGCTCCCATGGTCGTATGCCGTCTTCTG	3214	0.3252322111439087	No Hit
CTGTCTCTTATACACATCTGACGCTCCCATGGTCGTATGCCGTCTTCTGC	2795	0.28283261672284526	No Hit
AAAGCTGTCTCTTATACACATCTGACGCTCCCATGGTCGTATGCCGTCTT	1569	0.15877079629271706	No Hit
TCCGCTACGACCAACTCATACACCTGTCTCTTATACACATCTGACGCTCC	1440	0.14571698321320115	No Hit
AGCTGTCTCTTATACACATCTGACGCTCCCATGGTCGTATGCCGTCTTCT	1135	0.11485331662984952	No Hit
CGCTGTCTCTTATACACATCTGACGCTCCCATGGTCGTATGCCGTCTTCT	1020	0.10321619644268415	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CACGGGT	70	87.2844	3
CGTTTTT	4310	86.71875	1
ACGGGAT	475	86.09598	4
CGTAGGG	225	85.64315	2
CGCTACG	1455	84.95405	3
GCTACGA	1465	84.38696	4
CTACGAC	1465	84.3827	5
AGGGATG	2795	83.245094	5
TACGACC	1490	82.96687	6
ATAGCGG	120	82.27374	1
TCCGCTA	1535	81.77604	1
TAGCGGG	520	81.344925	2
ACGACCA	1485	81.03055	7
CTAGCGG	140	80.59469	1
AGGGAAT	1850	80.542076	5
TACGGGA	285	79.15671	3
AGGGTAC	330	78.34008	5
GGATGGC	1685	78.10762	7
CCGCTAC	1615	77.99263	2
ATAGGGA	1280	77.84258	3