SRR3127105.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127105.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	831363
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10516	1.2649107549890963	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	6343	0.7629639519680332	No Hit
GCTGTCTCTTATACACATCTGACGCTCCCATGGTCGTATGCCGTCTTCTG	3286	0.3952545398339835	No Hit
CCTGTCTCTTATACACATCTGACGCTCCCATGGTCGTATGCCGTCTTCTG	2869	0.34509594485200806	No Hit
CTGTCTCTTATACACATCTGACGCTCCCATGGTCGTATGCCGTCTTCTGC	2628	0.31610740434683765	No Hit
AAAGCTGTCTCTTATACACATCTGACGCTCCCATGGTCGTATGCCGTCTT	1365	0.16418820659567482	No Hit
TCCGCTACGACCAACTCATACACCTGTCTCTTATACACATCTGACGCTCC	1277	0.15360317935727233	No Hit
CGCTGTCTCTTATACACATCTGACGCTCCCATGGTCGTATGCCGTCTTCT	1035	0.12449435445166551	No Hit
AGCTGTCTCTTATACACATCTGACGCTCCCATGGTCGTATGCCGTCTTCT	1020	0.12269008844511965	No Hit
GGCTGTCTCTTATACACATCTGACGCTCCCATGGTCGTATGCCGTCTTCT	1012	0.1217278132416285	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TACGGGT	20	1.8382618E-5	93.99314	3
GATTCGA	15	6.9035386E-4	93.99314	8
CGTAGGG	240	0.0	88.16099	2
CGCTACG	1260	0.0	85.7874	3
CGTTTTT	3115	0.0	85.68862	1
GCTACGA	1275	0.0	84.40952	4
TACGGGA	185	0.0	83.831726	3
CGGGTAT	90	0.0	83.54946	5
CTACGAC	1290	0.0	83.42802	5
TACGACC	1285	0.0	83.38692	6
AGGGATG	1855	0.0	83.35241	5
TCCGCTA	1320	0.0	82.38274	1
CGAGGGA	485	0.0	81.396126	3
TAGCGGG	395	0.0	80.944435	2
ACGACCA	1315	0.0	80.769775	7
GCGTAGG	105	0.0	80.70145	1
AATGCGG	170	0.0	80.305855	1
CGACCAA	1325	0.0	79.805504	8
AGGGTAC	260	0.0	79.53266	5
CTAGCGG	95	0.0	79.28564	1