SRR3127073.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127073.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2437011
Sequences flagged as poor quality	0
Sequence length	100
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

$Per base sequence content$

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	20975	0.8606854872628806	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	4983	0.2044717894174462	No Hit
GCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTCTG	4012	0.16462789868408473	No Hit
CCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTCTG	3210	0.13171873249648852	No Hit
CTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTCTGC	3024	0.12408643210884153	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	2502	0.10266675037576768	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	6860	83.976166	1
ATAGGGC	1380	74.77093	3
AGGGAAT	2795	71.79424	5
AGGGATG	3725	71.40583	5
TAGGGCA	1435	70.920135	4
TAAGGGA	1990	70.555504	3
ATAGCGG	435	70.44222	1
CGTAGGG	750	70.35978	2
TAGAGGG	4205	70.02961	2
ACGGGTA	175	70.0008	4
ATAGGGA	2220	69.18825	3
AGGGCAT	2275	68.37386	5
TATAGGG	2240	67.72914	2
ATAGAGG	1780	67.53504	1
GAGGGAT	3070	67.37424	4
AGAGGGC	3455	67.366905	3
AGGGACT	3975	67.03313	5
AGTAGGG	4290	66.88484	2
AAGGGCG	980	66.34691	4
AAGGGCA	4010	66.03279	4