SRR3127067.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127067.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2294543
Sequences flagged as poor quality	0
Sequence length	100
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	65659	2.8615284176413343	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	5925	0.2582213538817969	No Hit
CGTTCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTT	5667	0.24697728480137437	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCT	5008	0.21825696881688422	No Hit
CGCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTCT	4291	0.18700891637245412	No Hit
CCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTCTG	3136	0.13667209548916712	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTC	2347	0.10228616330136328	No Hit
CTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTCTGC	2341	0.10202467332274881	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	20265	89.5815	1
ATAGGGC	1220	75.36126	3
GAATAGG	1305	72.301834	1
TAGGGCA	1005	71.77922	4
AGGGATG	3625	71.42925	5
TAGGGTC	540	70.72365	4
AGAGGGC	3480	68.82685	3
GGTAAGG	1345	67.345535	1
AGATAGG	1255	67.28824	1
AGGGCAT	1815	67.05878	5
AGGGAAT	2455	66.99603	5
AGTAGGG	3240	66.94008	2
ACGGGAT	635	66.82549	4
TAGAGGG	3990	66.64685	2
GATAGGG	3180	66.27563	2
AGGGACT	3400	66.20474	5
GTAGGGA	1505	66.10272	3
GTAGGGT	815	65.95089	3
ACGGGTA	230	65.59875	4
GAGGGAT	2880	65.32115	4