SRR3127047.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127047.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	680073
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10130	1.4895459752114846	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	2724	0.4005452355850034	No Hit
GCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTG	2342	0.3443747950587658	No Hit
CCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTG	1985	0.2918804304831981	No Hit
CTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTGC	1767	0.2598250481933557	No Hit
AAAGCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTT	964	0.14174948865783527	No Hit
GGTACTGAACCTACGAGTACACCGACTACGGCGGACTAATCTTCAACTCC	880	0.12939787346358406	No Hit
AGCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCT	735	0.10807663294969805	No Hit
GGCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCT	721	0.10601803041732284	No Hit
CGCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCT	685	0.10072448104835804	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	2885	85.70638	1
TACGGGA	160	85.183495	3
ATAGCGG	165	82.62041	1
GTACGGG	120	82.24614	2
TACGAGG	70	80.58543	1
GCGTAGG	70	80.58543	1
CGCTACG	445	80.2659	3
AGGGCGA	270	80.0762	5
CGTAGGG	135	80.07031	2
TACGACC	465	78.840805	6
TAGGGCA	340	78.79622	4
GGGCGAT	215	78.69977	6
CTACGAC	465	77.830025	5
GCTACGA	460	77.65424	4
AGGGATG	1505	77.45056	5
AGGGAAT	1315	76.84615	5
GGTAAGG	370	76.229454	1
TAGCGGG	410	75.65499	2
CGAGGGA	445	74.985245	3
CGAAGGG	420	74.97267	2