SRR3127046.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127046.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	542990
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7583	1.3965266395329565	No Hit
GCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTG	2217	0.40829481205915397	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	1986	0.3657525921287685	No Hit
CTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTGC	1881	0.34641521943313874	No Hit
CCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTG	1749	0.32210537947291845	No Hit
AAAGCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTT	929	0.1710897069927623	No Hit
GGCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCT	762	0.1403340761339988	No Hit
AGCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCT	694	0.12781082524540047	No Hit
GGTACTGAACCTACGAGTACACCGACTACGGCGGACTAATCTTCAACTCC	674	0.1241275161605186	No Hit
CGCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCT	651	0.11989171071290447	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCTACG	365	86.49389	3
CGTTTTT	2155	85.33787	1
GTACGGG	95	84.31965	2
TCCGCTA	375	84.24962	1
GCTACGA	380	83.07966	4
CGTAGGG	165	82.816635	2
GGGCGAT	160	82.23945	6
TAGGGTC	115	81.94749	4
AGGGAAT	1095	81.542046	5
TAACGGG	95	79.35967	2
CTACGAC	400	78.7149	5
TAGCGGG	250	77.27648	2
AGGGATG	1190	77.00692	5
TACGACC	410	76.79502	6
GGTAAGG	340	76.27956	1
ATAGCGG	130	76.172874	1
CGAGGGA	305	75.700676	3
GGATGGC	980	75.286255	7
AGGGCTA	275	75.19035	5
CGGGAAT	250	75.190346	5