SRR3127037.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127037.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2313745
Sequences flagged as poor quality	0
Sequence length	100
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	21784	0.9415039254541879	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	5664	0.2447979358140158	No Hit
CCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTG	3762	0.16259354423240244	No Hit
GCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTG	3519	0.15209109041834776	No Hit
CTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTGC	2982	0.12888196408852315	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	6530	85.682396	1
GTACGGG	560	72.35158	2
AGGGATG	2735	72.16714	5
TAGCGGG	1130	71.29437	2
ATAGAGG	1480	71.022705	1
TGTAGGG	1490	69.87851	2
ATAGGGC	1180	69.068954	3
ATGTAGG	725	68.91629	1
AGGGCAT	2165	68.80958	5
ACGGGAT	565	68.37293	4
GGTAAGG	1355	67.834305	1
TAGGGAT	1245	67.73333	4
AGTAGGG	3520	67.5906	2
GAATAGG	1210	67.393005	1
TAGAGGG	4100	67.33663	2
AGAGGGC	3030	67.3231	3
ATAGGGA	1920	67.230774	3
AAGAGGG	7545	67.12539	2
TAGGGCA	1135	66.411446	4
AGGGAAT	2500	65.980354	5