SRR3126983.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126983.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2460820
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	62684	2.547280987638267	No Hit
CGTTCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTT	6569	0.26694353914548813	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCT	5500	0.2235027348607375	No Hit
CGCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCT	4914	0.19968953438284798	No Hit
CCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTG	3710	0.15076275387878837	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2826	0.1148397688575353	No Hit
CTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTGC	2766	0.11240155720450906	No Hit
CGTCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTC	2556	0.10386781641891728	No Hit
GCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTG	2519	0.10236425256621776	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTC	2510	0.10199852081826384	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	18150	89.21037	1
AGGGATG	3280	72.06696	5
ATAGGGC	1465	71.0985	3
AGTAGGG	3805	70.604904	2
TAGGGCG	435	69.342026	4
TAGAGGG	3950	69.3256	2
AGAGGGC	3740	69.184135	3
ATAGAGG	1595	68.28778	1
AGGGAAT	2810	67.89875	5
ATAGGGA	2160	67.85977	3
TAGGGCA	1265	67.8089	4
TAGCGGG	1300	67.79738	2
GAGGGAT	2595	67.745	4
AGATAGG	1230	67.468216	1
GTAGGGC	1160	67.44595	3
ACGGGAT	580	66.63335	4
AGGGTAC	1195	66.46009	5
GAATAGG	1405	66.44779	1
CGTAGGG	520	66.16589	2
AAGGGTA	1770	66.03652	4