SRR3126978.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126978.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	969855
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	13184	1.359378463790979	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	4734	0.4881142026385388	No Hit
GCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTCTG	3602	0.3713957241030876	No Hit
CCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTCTG	3224	0.3324208257935465	No Hit
CTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTCTGC	2956	0.30478782910847496	No Hit
GGTACTGAACCTACGAGTACACCGACTACGGCGGACTAATCTTCAACTCC	1348	0.1389898489980461	No Hit
AAAGCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTT	1299	0.1339375473653278	No Hit
AGCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTCT	1246	0.12847281294626517	No Hit
GGCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTCT	985	0.10156157363729629	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTAGGG	330	86.87308	2
CGTTTTT	3915	86.60471	1
TAGGGTA	340	85.704666	4
CGCTACG	810	84.71047	3
AGGGATG	2245	81.22824	5
CTACGAC	840	81.1298	5
ACGGGAT	405	80.07293	4
GCTACGA	860	79.789566	4
GCGTAGG	220	79.08918	1
TACGGGT	60	78.32818	3
TAAGGGA	940	77.994865	3
GTAGGGT	345	77.647064	3
GTAGGGC	420	77.209206	3
CGAAGGG	800	76.957436	2
TAAGCGG	165	76.95164	1
ACGACCA	875	76.810326	7
TCCGCTA	930	76.354034	1
ATAGCGG	180	75.76411	1
TACGACC	900	75.721146	6
TAGGGAT	1015	75.01371	4