SRR3126968.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126968.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2543955
Sequences flagged as poor quality	0
Sequence length	100
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	65269	2.5656507288847483	No Hit
CGTTCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTT	6683	0.26270118771755	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCT	6163	0.2422605745777736	No Hit
CGCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTCT	5023	0.197448461155956	TruSeq Adapter, Index 15 (95% over 21bp)
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	3824	0.15031712432020222	No Hit
CCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTCTG	3651	0.14351668956408425	No Hit
CTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTCTGC	2822	0.1109296351547099	TruSeq Adapter, Index 15 (95% over 23bp)
CGTTTTCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTC	2778	0.10920004481211343	No Hit
CGTCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTC	2680	0.10534777541269401	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	20525	89.57372	1
ACGGGAT	650	75.409325	4
ATAGGGC	1460	71.987495	3
GAATAGG	1475	70.96947	1
AGGGATG	3745	70.772934	5
AGTAGGG	3830	68.29797	2
AGAGGGC	3850	67.697	3
AGGGTAC	1015	67.59689	5
GGTAAGG	1520	66.69686	1
ACGGGTA	305	66.44674	4
TAGAGGG	4515	65.66085	2
ATAGGGA	2045	65.22261	3
TGAAGGG	4245	65.06292	2
TAGGGCA	1365	64.91279	4
GTAGGGC	1330	64.84918	3
AGGGAAT	2475	64.74692	5
TAAGGGA	2275	64.4294	3
ATAAGGG	3365	64.14961	2
GAGGGAT	2940	63.963264	4
ATAGAGG	1790	63.485504	1