SRR3126963.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126963.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2897989
Sequences flagged as poor quality	0
Sequence length	100
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	83010	2.8644001064186235	No Hit
CGTTCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTT	6449	0.22253362590403206	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCT	5902	0.20365846799280468	No Hit
CGCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCT	4924	0.1699109278882701	No Hit
CCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTG	4256	0.1468604608230052	No Hit
CTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC	3043	0.10500384922095979	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTC	2947	0.10169120724750852	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2946	0.10165670056028507	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	25590	88.32763	1
AGGGATG	4775	74.907295	5
TAGGGCA	1440	72.464584	4
ATAGGGC	1725	71.930435	3
TAGAGGG	4975	70.19054	2
AGGGTAC	1170	69.49812	5
GGTAAGG	1610	69.21739	1
ATAGAGG	2280	67.64439	1
CGTAGGG	740	67.32201	2
AGAGGGC	4120	67.30583	3
AGTAGGG	4310	66.62647	2
GAATAGG	1645	66.60131	1
GTAGGGC	1405	65.90035	3
GTACGGG	535	65.885574	2
TAGGGTC	710	65.54087	4
ACGGGAT	805	65.39695	4
TGTAGGG	2225	65.26965	2
TAGGGAT	1775	64.87884	4
AGGGCAT	2330	64.7533	5
GAGGGAT	3535	64.489296	4