SRR3126962.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126962.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2318294
Sequences flagged as poor quality	0
Sequence length	100
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	61790	2.665321999711857	No Hit
CGTTCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTT	6121	0.2640303602562919	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCT	5416	0.23362006717008282	No Hit
CGCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCT	4779	0.20614296547374922	No Hit
CCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTG	3518	0.15174951925855823	No Hit
CTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC	2636	0.11370430152517325	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTC	2565	0.11064170463280325	No Hit
CGTCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTC	2515	0.10848494625789482	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2412	0.10404202400558342	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	19590	89.0137	1
AGGGATG	3645	75.68105	5
ATAGGGC	1365	73.16605	3
TAGAGGG	3840	69.56279	2
TAGGGCA	1185	69.1731	4
GGTAAGG	1200	69.14143	1
ATAGGGA	1880	68.659256	3
GAGGGAT	2595	67.16929	4
AGAGGGC	3235	66.84128	3
TAGGGAT	1390	66.76637	4
AGTACGG	290	66.64888	1
CGTAGGG	665	66.59342	2
TAAGAGG	1650	66.28435	1
GTACGGG	505	66.2357	2
GTAGGGA	1740	66.06128	3
AGTAGGG	3720	65.47459	2
TATAGGG	1660	65.274704	2
ATAGCGG	455	65.273384	1
GAATAGG	1230	65.15545	1
GTAGGGC	1175	64.95065	3