SRR3126961.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126961.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2408152
Sequences flagged as poor quality	0
Sequence length	100
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	64665	2.685254086951322	No Hit
CGTTCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTT	5918	0.2457486072307728	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCT	5218	0.21668067464180002	No Hit
CGCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCT	4739	0.19678990362734577	No Hit
CCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTG	3511	0.14579644474269066	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2577	0.1070115175454041	No Hit
CTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC	2507	0.10410472428650684	No Hit
CGTCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTC	2503	0.10393862181456984	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTC	2465	0.10236064833116845	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	20340	89.05432	1
AGGGATG	3565	72.63871	5
AGGGTAC	895	71.94053	5
ATAGGGC	1275	70.77292	3
GAATAGG	1370	70.05753	1
ATAGGGA	2030	69.22313	3
CGTAGGG	720	68.55531	2
AGTAGGG	3830	67.99787	2
TAGGGCA	1120	67.97873	4
GTAGGGT	885	67.97399	3
AGTAAGG	1270	66.68283	1
GAGGGAT	2730	66.450874	4
GTACGGG	680	66.36615	2
TAGAGGG	3855	66.093575	2
ATAGAGG	1620	65.635475	1
GGTAAGG	1355	65.62476	1
GTAGGGA	1775	65.399536	3
GAGGGTA	1025	65.10893	4
AGGGCAT	2020	64.67993	5
AAGGGTA	1580	64.5474	4