SRR3126951.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126951.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1524627
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	18381	1.2056063548658131	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	12967	0.8505031066614982	No Hit
GCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCTG	4561	0.2991551376172664	No Hit
CTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCTGC	4204	0.27573957433523083	No Hit
CCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCTG	3722	0.2441252844138271	No Hit
AAAGCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTT	2583	0.1694184872759042	No Hit
GGTACTGAACCTACGAGTACACCGACTACGGCGGACTAATCTTCAACTCC	2322	0.1522995460529034	No Hit
TCCGCTACGACCAACTCATACACCTGTCTCTTATACACATCTGACGCCGC	2320	0.15216836642667353	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ATAGCGG	245	88.27751	1
CGTTTTT	5810	87.15613	1
TCCGCTA	2455	85.033455	1
CGCTACG	2460	84.2596	3
AGGGATG	5305	83.54918	5
GCTACGA	2500	83.29292	4
CTACGAC	2570	81.20181	5
GGATGGC	4230	80.447784	7
GAATGCC	2180	79.989555	8
ACGACCA	2585	79.27602	7
GAGGGAT	3105	78.87157	4
GGAATGC	2280	78.336586	7
TAACGGG	660	78.336586	2
TACGACC	2665	78.30463	6
CGGGATG	1040	78.185936	5
CGACCAA	2630	78.0983	8
AGGGTAT	995	77.47056	5
AAGGGAT	3855	76.329834	4
AAGGGTA	1060	75.82887	4
GATGACC	3045	75.78969	8