SRR3126949.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126949.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1282353
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	13624	1.0624219696136712	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	10494	0.8183394120027794	No Hit
GCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCTG	4185	0.3263531960388442	No Hit
CTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCTGC	3737	0.29141741782488906	No Hit
CCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCTG	2985	0.23277521868003584	No Hit
AAAGCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTT	2289	0.178499991811927	No Hit
TCCGCTACGACCAACTCATACACCTGTCTCTTATACACATCTGACGCCGC	2218	0.17296329481819747	No Hit
GGTACTGAACCTACGAGTACACCGACTACGGCGGACTAATCTTCAACTCC	2063	0.16087613940935142	No Hit
AGCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCT	1343	0.10472935299406638	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	3965	87.3301	1
AGGGATG	3920	84.52301	5
CGCTACG	1850	82.05456	3
TCCGCTA	1890	81.3983	1
GCTACGA	1880	80.74518	4
GGATGGC	3265	80.319855	7
ACGGGTA	250	78.955284	4
CTACGAC	1935	78.69298	5
TACGACC	1935	78.69298	6
ACGGGAT	660	78.32865	4
ACGACCA	1885	78.03777	7
TACGCGG	85	77.48872	1
AGGGAAT	2505	77.296776	5
GGATGAC	2510	77.1428	7
CGAGGGA	695	76.412704	3
AGGGCAT	1390	76.412704	5
AAGGGCG	475	76.18492	4
GATGGCA	3200	75.782974	8
GAATGCC	1830	75.24687	8
AAGGGAT	3075	74.88983	4