SRR3126948.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126948.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2621371
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	95738	3.6522109995113246	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCGTCGTTGATCGTATGCCGTCT	6894	0.2629921518167402	No Hit
CGTTCTGTCTCTTATACACATCTGACGCGTCGTTGATCGTATGCCGTCTT	6888	0.2627632639561512	No Hit
CGCTGTCTCTTATACACATCTGACGCGTCGTTGATCGTATGCCGTCTTCT	5192	0.198064295362999	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	3588	0.13687494063221117	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCGTCGTTGATCGTATGCCGTC	3517	0.13416643428190822	No Hit
CCTGTCTCTTATACACATCTGACGCGTCGTTGATCGTATGCCGTCTTCTG	3342	0.1274905383480629	No Hit
CGTCTGTCTCTTATACACATCTGACGCGTCGTTGATCGTATGCCGTCTTC	3017	0.11509244589949306	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	28810	88.88669	1
ATAGGGC	1575	74.601295	3
AGGGATG	3450	71.52267	5
GAATAGG	1705	70.60215	1
GTACGGG	600	68.93028	2
GTAGGGA	1775	68.57855	3
AGTAGGG	3785	67.7962	2
AATAGGG	3735	67.571304	2
ATAGGGA	1970	67.51607	3
AGTAAGG	1675	66.53282	1
TAGGGCA	1265	66.50806	4
AGATAGG	1560	66.31327	1
ATGTAGG	795	66.245026	1
GTAAGGG	3795	66.13146	2
ACGGGAT	655	66.01739	4
GGATAGG	1710	65.721	1
TAGAGGG	4500	65.69265	2
TAGCGGG	1470	65.2216	2
AGGGAAT	2625	65.17418	5
GTAGGGC	1140	65.13871	3