SRR3126947.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126947.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2066117
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	72398	3.5040609994496923	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCGTCGTTGATCGTATGCCGTCT	6746	0.32650619495410954	No Hit
CGTTCTGTCTCTTATACACATCTGACGCGTCGTTGATCGTATGCCGTCTT	6527	0.3159066016106542	No Hit
CGCTGTCTCTTATACACATCTGACGCGTCGTTGATCGTATGCCGTCTTCT	4658	0.2254470584192473	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCGTCGTTGATCGTATGCCGTC	3201	0.1549283027050259	No Hit
CCTGTCTCTTATACACATCTGACGCGTCGTTGATCGTATGCCGTCTTCTG	3153	0.1526051041639946	No Hit
CGTCTGTCTCTTATACACATCTGACGCGTCGTTGATCGTATGCCGTCTTC	2971	0.1437963096959175	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2732	0.13222871696036573	No Hit
CTGTCTCTTATACACATCTGACGCGTCGTTGATCGTATGCCGTCTTCTGC	2138	0.10347913501510321	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	22165	89.38866	1
ATAGGGC	1095	74.883606	3
GAATAGG	1135	72.28488	1
ACGGGAT	550	71.11595	4
AGGGATG	2935	70.45079	5
CGTTTCT	1065	69.5095	1
AATAGGG	2540	68.83556	2
TAGGGCA	975	68.15003	4
AGTAGGG	2950	67.89529	2
ATAGGGA	1500	67.86004	3
TAGAGGG	3315	67.385666	2
GGTAAGG	1320	67.154945	1
AGGGACT	2255	66.270744	5
GTAGGGC	1030	65.88353	3
TAGGGAT	1120	65.638435	4
GATAGGG	2770	65.50187	2
AGAGGGC	2740	65.35588	3
GTACGGG	400	64.80006	2
ATAGGGT	655	64.751945	3
ATAAGGG	2665	64.54586	2