SRR3126946.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126946.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2127801
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	74609	3.5063899302613355	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCGTCGTTGATCGTATGCCGTCT	6503	0.30562068539304194	No Hit
CGTTCTGTCTCTTATACACATCTGACGCGTCGTTGATCGTATGCCGTCTT	6201	0.2914276288055133	No Hit
CGCTGTCTCTTATACACATCTGACGCGTCGTTGATCGTATGCCGTCTTCT	4593	0.215856652008341	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCGTCGTTGATCGTATGCCGTC	3331	0.1565465943478737	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2963	0.13925174393658052	No Hit
CGTCTGTCTCTTATACACATCTGACGCGTCGTTGATCGTATGCCGTCTTC	2962	0.13920474706046287	No Hit
CCTGTCTCTTATACACATCTGACGCGTCGTTGATCGTATGCCGTCTTCTG	2947	0.13849979391869824	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	22830	89.1825	1
ATAGGGC	1330	75.26513	3
AGGGATG	2905	71.50591	5
GAATAGG	1185	70.69695	1
GATAGGG	2920	69.23	2
AGAGGGC	3190	69.095215	3
AATAGGG	2890	68.48461	2
TAGGGCA	945	67.63522	4
AGTAGGG	3010	67.472374	2
GTAGGGT	685	67.23592	3
ATAGGGA	1580	67.22289	3
CGTTTCT	1150	66.70966	1
AGGGACT	2190	66.52477	5
TAGCGGG	1275	66.36988	2
ATAGCGG	620	66.04297	1
TAGGGCG	385	65.91722	4
ATAGGGT	815	65.73748	3
TGTAGGG	1335	64.79556	2
AGATAGG	1210	64.56866	1
GTAGGGC	870	64.28261	3