SRR3126935.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126935.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5420606
Sequences flagged as poor quality	0
Sequence length	100
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	186700	3.444264349779342	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	26090	0.48131149912020904	No Hit
CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCC	15263	0.28157368382797054	No Hit
CGCTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTCTTCT	13730	0.2532927130287647	No Hit
CGTTCTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTCTT	11600	0.21399821348387985	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTCT	11537	0.21283598180720015	No Hit
AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	7353	0.13564903997818695	No Hit
CCTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTCTTCTG	6950	0.12821444687180733	No Hit
GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	6503	0.11996813640393714	No Hit
GAATCTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTCTT	6296	0.116149375180561	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTC	5741	0.10591066755266847	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	58270	90.63029	1
AGGGACT	11920	70.49507	5
GGTAAGG	2910	70.29043	1
GTTTTTT	76465	69.36149	2
TAGTAGG	1760	69.19697	1
AGTAGGG	7360	69.028336	2
ATAGGGA	3150	68.63139	3
ATAGGGC	2780	67.11525	3
AGTAAGG	3235	66.57192	1
TATAGGG	3715	65.91108	2
AGATAGG	2770	65.86458	1
AAGGGGC	17410	65.59565	4
GTATAGG	1745	65.21085	1
CAGGGAC	11295	64.49306	4
GGATAGG	2885	64.054054	1
TAGGGAC	2240	63.78126	4
GATAGGG	7060	63.773514	2
TAGGGAT	1895	63.736973	4
GTAAAGG	3380	63.71603	1
GTAAGGG	7680	63.52076	2