SRR3126934.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126934.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7985215
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	284941	3.5683572702801363	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	43503	0.5447943480544982	No Hit
CGCTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTCTTCT	14838	0.1858184156594406	No Hit
AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	12674	0.1587183313160635	No Hit
CGTTCTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTCTT	11069	0.13861868465658095	No Hit
GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	11025	0.1380676663057914	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTCT	10992	0.13765440254269923	No Hit
CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCC	10492	0.13139283037463612	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	87775	90.71417	1
ATAGGGC	3900	71.700455	3
AGGGACT	19320	71.17651	5
AGATAGG	4400	69.50301	1
GTTTTTT	116910	68.784355	2
AGTAGGG	11625	67.98582	2
GGTAAGG	4605	67.94148	1
ATAGGGA	4960	67.84235	3
ATAGAGG	5430	66.629944	1
TAGGGAC	3535	66.60669	4
TATAGGG	5435	66.43627	2
GGATAGG	4335	66.20392	1
AAGGGGC	26495	65.89682	4
GATAGGG	10960	65.67623	2
TAGTAGG	2780	65.32591	1
GTAGGGA	5375	64.79019	3
TAGGGCA	3010	64.48417	4
AATAGGG	9745	64.31199	2
CAGGGAC	17750	64.23356	4
AGGGGCT	31555	63.432083	5