SRR3126927.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126927.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1325488
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7576	0.5715630771459267	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA	4293	0.32388071412189323	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	4038	0.3046425165674831	No Hit
GGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAATGGACGGG	2994	0.22587907246236857	No Hit
GCTGTCTCTTATACACATCTGACGCCCAAATGCTCGTATGCCGTCTTCTG	2911	0.219617227768188	No Hit
GGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAAGGCATTGGTAT	2854	0.21531692478543749	No Hit
CTGTCTCTTATACACATCTGACGCCCAAATGCTCGTATGCCGTCTTCTGC	2565	0.19351363422377268	Illumina Single End Adapter 1 (95% over 21bp)
CCTGTCTCTTATACACATCTGACGCCCAAATGCTCGTATGCCGTCTTCTG	2465	0.1859692430259648	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCCCAAATGC	1385	0.10448981808963945	No Hit
GGGAATTCATCTCCTCTAACTTTGGAGAGGTAGGAATGGGAGTATTTGCA	1329	0.100264959018867	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTAGGG	435	87.55666	2
GACCGAT	90	83.5522	8
GCGTAGG	215	83.18882	1
CGTTTTT	3260	82.58445	1
TAGGGCG	215	80.88048	4
AGGGCGC	305	80.12794	5
AGGGATG	2765	80.05827	5
AGTAAGG	860	79.35776	1
ACGGGAA	415	79.273926	4
CTAGCGG	95	79.27134	1
ACGGGAT	350	79.22539	4
AGGGCAT	1480	78.11849	5
AAGGGCA	1780	77.89013	4
ACGGGTA	175	77.88259	4
GCTACGA	660	76.906006	4
GGTAAGG	695	76.52679	1
CGAGGGA	705	75.99695	3
AGGGAAT	2130	75.90305	5
CGGGAAT	440	75.83787	5
CGAAGGG	1135	75.81387	2