SRR3126922.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126922.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1989172
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	20791	1.0452087602278737	No Hit
CTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCTGC	5842	0.29369003786500114	No Hit
CCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCTG	5180	0.26040985897649876	No Hit
GCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCTG	4969	0.24980243035795802	No Hit
CGCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCT	4289	0.21561735234559906	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA	4075	0.2048591072064155	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2976	0.1496099884776178	No Hit
GGCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCT	2207	0.1109506870195237	No Hit
AGCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCT	2186	0.1098949713750244	No Hit
GGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAATGGACGGG	2047	0.10290713925190985	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	7330	85.09461	1
AGGGCAT	1825	78.28117	5
TAGGGCA	1030	78.220474	4
AGGGTAC	830	75.304375	5
AGAGGGT	1800	74.33741	3
AGAGGGC	2430	73.87207	3
ACGGGAT	435	73.651436	4
GAGGGTA	960	73.617584	4
CGTAGGG	525	72.692116	2
TAAGGGA	1465	72.68292	3
AAGGGTC	1150	72.516525	4
GGTAAGG	1140	72.373474	1
TAGGGTA	725	72.135086	4
GTAGGGC	830	71.52437	3
AGGGAAT	2690	71.45254	5
TAGAGGG	3300	71.24398	2
TAGCGGG	855	71.086174	2
TGTAGGG	1245	70.76749	2
ATAGCGG	320	70.71922	1
AGTAAGG	1030	70.49036	1